PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN04930.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 332aa    MW: 35901.6 Da    PI: 6.392
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN04930.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92.1e-09181225554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  KHN04930.1 181 HSIAERLRRERIAERMKALQELVPSiN------KTDRAAMLDEIVDYVKFL 225
                 99***********************77......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.79E-15174235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.05E-10174230No hitNo description
PROSITE profilePS5088816.126176225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-14178236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-7181225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.9E-11182231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MAGNSGSEGL GDDFFEQILA VPEAGTVGML QLGSTTGAFR GASGLMPLGL NLEQAAFLRH  60
QVNVDDDVVH VNVDDATIHQ HHLTLHNNNN SSSPSSTAPI TDRDSMHMRG LFSAFGQLHT  120
PIRPTLPLPP PPRQPQLHLH HHNQQFQGQA AAAPASMAAM PQPPGIRPRV RARRGQATDP  180
HSIAERLRRE RIAERMKALQ ELVPSINKTD RAAMLDEIVD YVKFLRLQVK VLSMSRLGGA  240
GAVAQLVADV PLSAVEGDQD IEGGANEQAW DKWSNDGTEQ QVAKLMEEDV GAAMQFLQSK  300
ALCIMPISLA SAIFRMPQSE ASTGIKPESN SH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185190RLRRER
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1416380.0BT141638.1 Lotus japonicus clone JCVI-FLLj-6C12 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006606461.10.0PREDICTED: transcription factor UNE12-like isoform X1
SwissprotO227685e-78UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A0B2P6G20.0A0A0B2P6G2_GLYSO; Transcription factor UNE12
STRINGGLYMA20G36770.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112053239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.32e-65bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]